Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009775.1 Kokia drynarioides strain JFW-HI SEQ_124496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47368

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2603--2645
15
2.7
16
82
7
52
32
2
2
62
1.20
3745--3791
22
2.2
21
85
7
60
12
14
8
63
1.50
5964--5995
15
2.1
15
94
0
55
12
12
3
71
1.25
8041--8101
30
2.0
30
84
6
79
29
3
4
62
1.32
12212--12303
12
7.3
12
70
9
51
70
17
3
8
1.26
12198--12303
21
5.0
21
74
16
85
69
17
2
9
1.27
12215--12280
19
3.4
19
74
10
62
71
15
3
10
1.26
12252--12321
24
2.9
24
82
4
88
68
21
5
4
1.28
12339--12377
9
4.4
9
83
6
53
79
10
2
7
1.02
12328--12379
26
2.0
27
88
3
79
76
15
1
5
1.05
12870--12951
29
2.7
30
78
12
87
63
3
2
30
1.24
24403--24439
2
18.5
2
100
0
74
0
51
0
48
1.00
25968--26017
24
2.1
23
85
10
66
34
4
2
60
1.27
26002--26145
58
2.5
57
85
5
182
44
1
2
52
1.21
29817--29863
21
2.2
21
84
0
58
23
4
65
6
1.33
37875--37925
26
2.0
26
84
7
68
52
5
0
41
1.25
41608--41643
16
2.2
17
90
9
58
50
0
0
50
1.00
41634--41670
19
2.0
19
89
5
58
40
2
2
54
1.29
43971--44007
2
18.5
2
100
0
74
0
0
48
51
1.00

Tables:   1

The End!