Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009789.1 Kokia drynarioides strain JFW-HI SEQ_124510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83022

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1219--1258
15
2.7
15
88
7
55
85
0
12
2
0.71
1204--1264
21
2.9
20
81
13
61
81
1
11
4
0.90
1656--2395
42
17.4
42
82
3
766
20
19
24
35
1.96
3343--3871
146
3.6
146
83
8
601
42
3
10
44
1.53
3341--3573
52
4.7
51
68
10
126
41
3
10
44
1.54
4464--4503
21
2.0
21
85
5
55
17
7
5
70
1.30
8231--8301
4
17.8
4
91
0
79
23
35
0
40
1.55
8231--8306
20
3.8
20
92
0
116
23
35
1
39
1.63
16550--16587
20
2.0
20
89
5
60
84
2
10
2
0.83
16997--17690
42
16.5
42
83
0
767
20
20
23
35
1.96
18516--18915
149
2.8
137
79
13
355
43
3
9
43
1.55
18641--19037
155
2.6
151
86
7
497
42
3
10
43
1.57
19575--19658
25
3.4
23
76
15
64
23
9
2
64
1.35
28854--28919
17
3.8
17
77
2
69
18
19
12
50
1.78
28840--28909
34
2.1
34
83
0
86
20
18
11
50
1.77
30200--30253
26
2.1
26
92
0
90
27
20
22
29
1.98
41352--41716
193
1.9
195
90
3
585
27
25
17
29
1.97
46405--46850
194
2.3
193
80
6
474
27
25
17
29
1.98
50557--50619
28
2.3
28
88
2
101
28
7
6
57
1.52
50567--50625
28
2.1
28
93
0
100
28
8
5
57
1.50
53537--53561
13
1.9
13
100
0
50
48
12
16
24
1.79
53891--53924
10
3.4
10
87
0
50
0
14
0
85
0.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65374--65591
24
9.1
24
82
0
211
29
23
15
31
1.95
65374--65591
48
4.5
48
83
2
249
29
23
15
31
1.95
65392--65592
72
2.8
72
80
4
235
29
23
15
30
1.96
74281--74338
6
9.8
6
75
16
50
55
1
0
43
1.10
74289--74340
17
3.1
17
88
5
79
57
1
0
40
1.10

Tables:   1

The End!