Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009793.1 Kokia drynarioides strain JFW-HI SEQ_124514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56589

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
731--765
13
2.7
13
95
0
61
34
0
5
60
1.21
2246--2297
23
2.3
24
83
9
65
57
1
3
36
1.28
11238--11269
13
2.5
13
100
0
64
0
6
0
93
0.34
12876--12943
4
16.5
4
76
11
57
70
0
27
1
0.96
12877--12919
21
2.0
21
86
0
59
74
0
23
2
0.93
12890--12940
19
2.8
18
82
11
59
66
0
33
0
0.92
13285--13327
21
2.1
21
86
4
61
25
2
13
58
1.48
13809--13858
16
3.2
16
71
21
52
60
6
0
34
1.21
13891--13985
30
3.2
30
65
14
79
37
5
11
45
1.63
15154--15238
43
2.0
43
83
4
109
30
12
10
45
1.76
18818--18893
4
19.0
4
85
5
73
0
35
0
64
0.94
19755--19807
23
2.3
23
93
0
88
28
24
16
30
1.97
20101--20135
18
1.9
18
88
0
52
68
0
0
31
0.90
21580--21618
18
2.2
18
86
9
53
30
2
0
66
1.05
24165--24210
20
2.3
20
85
7
58
36
23
6
32
1.81
26586--26682
48
2.0
48
95
0
176
40
3
6
50
1.43
26750--26796
21
2.2
22
85
11
62
59
8
17
14
1.59
28248--28312
26
2.6
27
80
7
66
55
1
0
43
1.09
28209--28349
58
2.4
57
85
5
185
51
1
1
46
1.18
28209--28374
59
2.8
58
81
8
194
52
1
1
43
1.22
29951--30128
89
2.0
89
100
0
356
22
28
21
28
1.99
40342--40409
29
2.2
32
80
14
74
61
8
1
27
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42219--42260
17
2.5
17
88
0
57
61
2
33
2
1.21
43502--43560
29
2.0
29
86
0
82
28
3
11
55
1.52
45881--46018
70
2.0
70
97
0
258
37
26
12
23
1.90
49904--49930
5
5.4
5
100
0
54
0
18
0
81
0.69
51271--51313
18
2.3
19
80
15
54
37
2
0
60
1.10
51254--51315
33
1.9
33
83
9
83
38
3
1
56
1.25
55289--55396
27
3.9
26
81
11
92
30
0
9
60
1.28
55326--55374
13
3.7
13
89
5
80
34
0
8
57
1.29
55619--55682
31
2.0
33
84
9
87
53
9
9
28
1.64
55689--55728
20
2.1
19
85
4
53
42
5
10
42
1.60

Tables:   1

The End!