Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009796.1 Kokia drynarioides strain JFW-HI SEQ_124517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76799

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
272--334
29
2.2
29
94
0
108
30
20
20
28
1.98
5838--5878
21
2.1
19
86
9
55
26
2
21
48
1.63
7067--7112
22
2.0
22
83
4
56
45
13
4
36
1.63
12104--12142
17
2.3
17
86
0
51
17
12
23
46
1.83
13549--13742
29
6.8
28
73
14
92
33
5
26
34
1.79
13552--14033
28
17.0
28
75
14
325
35
3
25
35
1.72
13845--13940
49
1.9
51
87
8
144
36
3
21
38
1.70
13893--14085
30
6.6
29
75
11
153
38
2
22
36
1.66
15116--15161
15
3.0
15
82
14
58
36
0
4
58
1.18
15142--15383
121
2.0
121
91
0
394
43
6
9
40
1.62
15906--15951
20
2.4
19
80
16
51
34
6
8
50
1.59
15943--16026
6
14.0
6
75
8
73
55
1
1
41
1.15
15951--16020
17
4.1
17
87
3
104
58
1
1
38
1.16
16382--17590
209
5.8
209
88
2
1732
22
21
18
37
1.94
16382--17590
625
1.9
625
88
2
1840
22
21
18
37
1.94
17670--17901
78
3.0
75
75
11
209
27
20
28
23
1.99
17719--17902
39
4.7
38
74
9
149
27
20
28
23
1.99
17890--17986
41
2.4
41
82
6
142
34
15
18
31
1.92
18250--18567
50
6.4
50
74
12
262
18
32
15
33
1.92
18286--18537
99
2.5
98
79
11
264
19
32
14
33
1.92
18378--18564
98
1.9
98
84
2
250
18
32
16
33
1.93
19456--19530
10
7.9
9
70
16
53
6
13
1
78
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24739--24960
58
3.8
57
76
10
198
34
6
24
34
1.81
24798--25336
29
18.6
28
71
15
264
34
4
25
35
1.76
25005--25160
84
1.8
86
83
5
210
33
4
28
32
1.77
25096--25312
117
1.9
117
85
7
307
33
1
25
38
1.67
26408--26649
121
2.0
121
94
0
421
44
7
8
39
1.63
26436--26678
121
2.0
121
83
2
301
45
8
9
35
1.68
27209--27309
6
17.0
6
69
9
64
55
2
1
39
1.26
27217--27303
17
5.1
17
84
8
104
57
3
2
36
1.28
33790--33820
9
3.4
9
95
0
53
6
35
12
45
1.68
35978--36072
44
2.1
44
82
3
118
30
6
26
36
1.81
36163--36233
37
1.9
37
85
0
97
42
4
5
47
1.46
43378--43448
32
2.2
32
100
0
142
42
19
21
16
1.89
52050--52101
15
3.3
15
73
10
50
44
0
0
55
0.99
52057--52110
18
3.2
18
79
10
69
46
0
0
53
1.00
52058--52116
18
3.3
18
75
13
59
47
0
0
52
1.00
59435--59480
10
4.4
10
84
15
58
84
2
13
0
0.71
62569--62625
26
2.3
25
85
11
82
33
0
3
63
1.12
62604--62633
15
1.9
15
93
6
51
40
0
0
60
0.97
63034--63081
20
2.4
20
82
6
53
58
2
0
39
1.10
63700--63729
6
5.2
6
92
8
53
33
30
0
36
1.58
64473--64573
12
8.2
12
71
13
53
29
1
2
65
1.18
64537--64573
3
12.3
3
100
0
74
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71520--71577
21
2.8
21
86
0
89
29
12
25
32
1.92

Tables:   1

The End!