Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009805.1 Kokia drynarioides strain JFW-HI SEQ_124526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  143196

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12850--12883
2
18.0
2
88
11
54
50
0
0
50
1.00
13041--13074
16
2.1
16
89
10
52
38
0
0
61
0.96
20798--20875
40
2.0
40
100
0
156
26
25
10
37
1.88
36289--36327
17
2.3
17
86
0
51
15
10
25
48
1.76
36317--36412
41
2.3
41
96
0
174
29
6
28
36
1.81
41880--41912
2
17.0
2
93
6
59
48
0
0
51
1.00
47149--47198
25
2.0
26
88
4
75
60
0
2
38
1.09
50396--50448
15
3.5
15
75
17
56
67
1
0
30
1.01
50775--50832
18
3.2
18
80
4
55
36
0
3
60
1.14
57745--57776
15
2.0
17
88
11
50
31
6
6
56
1.49
61716--61792
38
2.0
38
87
0
109
37
27
12
22
1.91
62474--62566
46
2.0
46
91
0
150
48
13
8
29
1.73
68652--68677
3
8.7
3
100
0
52
30
0
0
69
0.89
80583--80636
21
2.6
21
84
0
72
27
12
25
33
1.93
86658--86731
29
2.6
29
100
0
148
43
12
12
32
1.79
89642--89689
24
1.9
26
84
16
66
45
0
22
31
1.53
89763--89895
23
5.9
22
80
7
133
11
22
27
38
1.88
95244--95300
23
2.5
23
88
0
78
29
28
10
31
1.90
99962--100066
51
2.1
51
100
0
210
37
7
3
51
1.49
102566--102610
23
2.0
23
86
8
65
53
2
0
44
1.13
103810--103836
3
9.0
3
100
0
54
33
0
0
66
0.92
106400--106450
15
3.3
15
69
15
50
60
3
1
33
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106403--106465
31
2.0
31
93
0
108
57
6
3
33
1.40
115141--115215
39
1.9
39
91
5
125
44
22
21
12
1.85
115180--115274
23
4.1
23
83
5
129
42
22
24
11
1.86
118748--118796
24
2.0
24
88
0
71
28
14
4
53
1.59
120169--120222
27
2.0
27
88
0
81
38
14
12
33
1.85
120738--120812
24
3.1
24
88
0
114
26
13
6
53
1.64
121875--122050
89
2.0
89
88
0
262
32
20
26
21
1.97
124153--124327
91
1.9
92
90
1
280
21
16
10
52
1.74

Tables:   1

The End!