Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009811.1 Kokia drynarioides strain JFW-HI SEQ_124532, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  195968

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15872--15919
21
2.2
20
85
10
60
62
6
0
31
1.20
15883--15925
21
2.0
21
90
0
68
60
2
0
37
1.10
16161--16205
22
2.0
22
83
8
56
33
8
2
55
1.43
20138--20162
2
12.5
2
100
0
50
52
0
0
48
1.00
23540--23568
4
7.2
4
100
0
58
24
0
24
51
1.48
27613--27646
11
3.3
11
92
8
54
88
5
5
0
0.64
29585--29620
2
18.0
2
94
0
63
52
0
0
47
1.00
52035--52061
3
9.0
3
100
0
54
33
0
0
66
0.92
61465--61516
3
17.3
3
87
0
77
32
61
0
5
1.20
79838--79895
22
2.6
22
75
5
64
15
8
10
65
1.46
84437--84514
32
2.5
31
77
4
86
32
3
12
51
1.58
85379--85408
3
10.0
3
100
0
60
66
0
0
33
0.92
86292--86316
2
12.5
2
100
0
50
52
0
0
48
1.00
99230--99356
30
4.2
31
69
12
86
42
9
7
40
1.66
102054--102101
19
2.6
18
80
3
51
66
6
2
25
1.26
105045--105313
132
2.0
132
97
0
502
21
22
15
39
1.91
112148--112264
61
1.9
60
84
1
153
47
17
13
21
1.82
126874--126946
32
2.3
32
100
0
146
43
16
8
31
1.77
126906--127142
86
2.7
87
83
5
300
43
15
8
32
1.77
127376--127537
86
1.9
86
83
5
211
43
17
9
29
1.80
127818--128156
168
2.0
169
86
2
468
45
14
10
28
1.79
129727--129862
30
4.6
30
79
7
143
37
25
4
33
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133340--134018
207
3.4
199
78
9
644
34
21
11
32
1.88
135826--135886
31
2.0
31
83
6
79
31
6
13
49
1.67
137050--137082
10
3.0
11
86
13
50
72
3
0
24
0.98
137632--137684
23
2.3
23
80
0
61
50
1
7
39
1.41
139628--139685
28
2.1
28
90
0
89
31
15
17
36
1.91
141915--141975
31
2.0
31
96
0
113
27
9
4
57
1.52
144822--144876
21
2.4
24
88
8
80
16
10
32
40
1.83
144942--144989
21
2.3
21
81
0
60
27
18
22
31
1.97
146944--147013
29
2.3
29
85
9
88
27
14
11
47
1.78
162592--162632
21
2.0
21
90
9
66
39
19
19
21
1.93
168700--168748
21
2.3
22
85
3
64
42
0
4
53
1.20
176319--176367
16
3.0
16
78
3
53
18
2
6
73
1.14
176786--176880
48
2.0
48
95
0
172
47
13
9
29
1.74
189855--189898
22
2.0
22
100
0
88
40
4
13
40
1.65
191073--191104
2
16.0
2
100
0
64
50
0
50
0
1.00
193659--193738
35
2.3
35
97
0
151
13
7
25
53
1.66
194734--194764
14
2.1
15
94
5
55
61
6
0
32
1.21
195351--195823
233
2.0
233
90
0
732
38
20
16
24
1.92

Tables:   1

The End!