Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NTFQ01009813.1 Kokia drynarioides strain JFW-HI SEQ_124534, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 34973

Tables:   1   

This is table  1  of  1  ( 29 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1121--1204
26
3.3
26
96
1
152
9
28
22
39
1.85
5011--5062
21
2.5
21
93
0
86
17
3
26
51
1.62
5031--5175
28
5.2
28
73
6
98
22
4
23
49
1.68
5038--5170
14
9.5
14
67
14
60
21
5
24
48
1.70
5046--5154
42
2.6
42
89
2
148
21
5
22
51
1.68
5124--5181
28
2.1
28
86
0
80
24
3
24
48
1.66
16972--17032
25
2.5
24
78
10
61
62
8
9
19
1.51
17197--17540
29
11.7
29
75
7
113
38
2
25
33
1.71
17173--17574
59
6.8
59
73
9
264
37
2
25
34
1.70
17173--17574
30
13.6
29
75
7
263
37
2
25
34
1.70
17558--17601
23
2.0
23
95
4
81
36
0
25
38
1.56
19377--20513
57
20.1
58
69
13
384
41
13
14
30
1.85
19603--20479
120
7.7
117
73
12
459
40
14
15
29
1.86
20191--20286
50
1.9
50
82
6
122
43
14
12
29
1.82
20212--20512
112
2.7
115
78
7
318
40
12
13
32
1.83
20496--20593
41
2.4
40
89
3
142
42
12
12
32
1.79
20643--21407
58
13.5
57
70
14
329
42
11
16
29
1.83
20797--21408
58
10.6
58
74
11
400
42
10
16
30
1.82
20799--21408
116
5.3
115
78
8
528
42
10
16
30
1.82
20867--21300
112
3.8
113
81
6
466
40
11
16
31
1.84
21263--21408
60
2.5
59
78
12
142
47
6
15
30
1.69
23669--23710
19
2.3
19
88
12
61
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25196--25271
39
1.9
40
94
2
136
38
2
7
51
1.45
29211--29266
21
2.7
21
91
0
85
16
39
5
39
1.71
32056--32085
16
1.9
16
93
6
53
63
3
0
33
1.11
33316--33348
16
2.1
16
100
0
66
39
18
6
36
1.75
33473--33624
82
1.9
82
90
0
241
28
24
23
23
1.99
33668--33884
79
2.7
78
88
4
310
34
25
17
22
1.96
33829--34030
102
2.0
102
89
0
305
29
28
21
20
1.98

Tables:   1   

The End!