Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009818.1 Kokia drynarioides strain JFW-HI SEQ_124539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57751

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1136--1160
2
12.5
2
100
0
50
52
0
0
48
1.00
16336--16373
18
2.1
18
90
9
60
57
0
0
42
0.98
18978--19208
51
4.5
51
85
4
259
32
15
22
29
1.95
19157--19311
61
2.6
61
83
6
174
34
16
21
27
1.95
21233--21419
24
7.8
24
87
1
259
28
21
22
26
1.99
21233--21419
71
2.6
72
87
0
259
28
21
22
26
1.99
40646--40688
19
2.2
20
84
15
56
13
18
6
60
1.55
42195--42388
97
2.0
97
87
0
280
36
16
18
28
1.93
42732--42977
29
8.4
30
77
10
179
34
2
26
36
1.71
42847--42977
59
2.2
59
87
2
183
34
1
25
38
1.65
42838--43055
29
7.2
30
79
10
201
36
3
24
35
1.72
42913--43043
66
2.0
66
89
3
201
35
3
24
36
1.74
42883--43074
95
2.0
96
80
3
217
35
3
24
35
1.73
44741--44860
28
4.2
28
78
6
82
32
5
28
34
1.79
44786--45055
29
8.9
30
76
11
167
35
3
25
35
1.74
44891--45021
66
2.0
66
86
3
183
36
3
22
36
1.73
44740--45031
59
4.9
59
74
12
195
34
4
26
34
1.75
46779--46898
17
7.3
17
78
12
117
56
2
0
40
1.13
46779--46898
6
20.8
6
75
8
115
56
2
0
40
1.13
46780--46864
29
2.9
28
81
6
98
56
2
0
41
1.12
46827--46892
23
2.9
23
95
0
105
59
3
0
37
1.13
56928--56954
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!