Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009862.1 Kokia drynarioides strain JFW-HI SEQ_124596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99856

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
175--259
43
2.0
43
81
4
100
30
10
10
48
1.72
829--962
45
3.0
45
85
0
178
31
26
21
20
1.98
957--999
21
2.0
21
86
0
59
20
34
16
27
1.94
1219--1258
20
1.9
21
85
10
55
50
17
2
30
1.59
2708--2779
36
2.0
36
100
0
144
19
19
13
47
1.83
10722--10772
27
1.9
26
88
4
75
37
1
15
45
1.58
24600--24713
57
2.0
57
98
0
219
26
27
21
24
2.00
36785--36809
6
4.2
6
100
0
50
52
32
16
0
1.44
44571--44630
16
3.7
16
74
12
59
43
5
5
46
1.47
53765--53792
14
2.0
14
100
0
56
35
7
21
35
1.81
58339--58378
21
2.0
21
90
5
64
40
0
10
50
1.36
59042--59092
25
2.0
25
92
0
84
37
17
3
41
1.68
59906--59930
13
1.9
13
100
0
50
64
0
0
36
0.94
73379--73412
17
1.9
18
88
5
52
20
2
29
47
1.65
76848--76909
25
2.4
26
82
15
76
38
1
24
35
1.65
77749--77774
6
4.3
6
100
0
52
50
15
19
15
1.79
87059--87102
22
2.0
22
95
0
79
29
22
13
34
1.93
98314--98371
29
2.0
28
87
9
82
34
12
3
50
1.57
98471--98613
69
2.1
70
86
4
200
48
10
9
31
1.70
99686--99817
21
6.3
20
72
16
92
13
2
43
40
1.57
99689--99814
41
3.0
40
80
10
105
13
2
42
41
1.57
99792--99842
26
2.0
26
84
7
68
21
0
31
47
1.51

Tables:   1

The End!