Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NTFQ01009870.1 Kokia drynarioides strain JFW-HI SEQ_124604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 4383
ACGTcount: A:0.35, C:0.19, G:0.16, T:0.30
Found at i:915 original size:49 final size:49
Alignment explanation
Indices: 856--1247 Score: 360
Period size: 49 Copynumber: 8.0 Consensus size: 49
846 GTACCGTGAA
* * * *
856 ACATGAAGGGAAATATTTAAGCCGTAACGGCGAATCTAGTACCACCAAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAAG
* ** * * * * *
905 ACATGGAGGGAAAGGCTTAAGTCGCAACGACGAA-CCGTGTACCTCAAAAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCC-AGTACCAC-GAAG
* * * *
955 ACACGAAGGGAAAGATTTAAGCCGCAACGACGAATTCGGTACCAC-AGAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGA-AG
* * * * * *
1004 ACGT-ACAGGGAAAGATTTAGGCCACAATGGTGAATCTAGTACCACGAAG
1 ACATGA-AGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAAG
* * **
1053 ACACGAATGGAAAGATTTAAGCCGCAACGGTAAATCCAGTACCACGAAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAAG
* *
1102 ACATGAAGGGAAAGATCTAAGCCGCAGCGGC-AGATCCAGTACCACGAAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGA-ATCCAGTACCACGAAG
* * * * * * * **
1151 ACATAAAGGGAAAGGTTTAAGTCACAATGGCGAACCCAATACCTTGAAG
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAAG
* *
1200 ACATGAAGGGAAAGATTTAAGCCGCAATGACGAATCCAGTACCACGAA
1 ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAA
1248 AATACGTGGG
Statistics
Matches: 272, Mismatches: 62, Indels: 18
0.77 0.18 0.05
Matches are distributed among these distances:
48 4 0.01
49 226 0.83
50 41 0.15
51 1 0.00
ACGTcount: A:0.39, C:0.21, G:0.25, T:0.15
Consensus pattern (49 bp):
ACATGAAGGGAAAGATTTAAGCCGCAACGGCGAATCCAGTACCACGAAG
Found at i:1710 original size:6 final size:6
Alignment explanation
Indices: 1689--1753 Score: 53
Period size: 6 Copynumber: 10.7 Consensus size: 6
1679 TTTAAGTTGG
** **
1689 TTTAAA TTTATT TTTAAA TTTAAA TTT--A TCTTAAA TTTAAA TTTATCTT
1 TTTAAA TTTAAA TTTAAA TTTAAA TTTAAA T-TTAAA TTTAAA TTTA--AA
1738 TTTAAA TTTAAA TTTA
1 TTTAAA TTTAAA TTTA
1754 CTCTAAATTT
Statistics
Matches: 46, Mismatches: 8, Indels: 10
0.72 0.12 0.16
Matches are distributed among these distances:
4 2 0.04
5 2 0.04
6 36 0.78
7 2 0.04
8 4 0.09
ACGTcount: A:0.38, C:0.03, G:0.00, T:0.58
Consensus pattern (6 bp):
TTTAAA
Found at i:1724 original size:17 final size:17
Alignment explanation
Indices: 1689--1768 Score: 90
Period size: 17 Copynumber: 4.5 Consensus size: 17
1679 TTTAAGTTGG
*
1689 TTTAAATTTATTTTTAAA
1 TTTAAATTTA-TCTTAAA
1707 TTTAAATTTATCTTAAA
1 TTTAAATTTATCTTAAA
1724 TTTAAATTTATCTTTTTAAA
1 TTTAAATTTATC---TTAAA
1744 TTTAAATTTA-CTCTAAA
1 TTTAAATTTATCT-TAAA
*
1761 TTTGAATT
1 TTTAAATT
1769 GATTTAAAAC
Statistics
Matches: 56, Mismatches: 2, Indels: 9
0.84 0.03 0.13
Matches are distributed among these distances:
16 1 0.02
17 29 0.52
18 10 0.18
19 1 0.02
20 15 0.27
ACGTcount: A:0.38, C:0.05, G:0.01, T:0.56
Consensus pattern (17 bp):
TTTAAATTTATCTTAAA
Found at i:1746 original size:37 final size:35
Alignment explanation
Indices: 1689--1773 Score: 118
Period size: 37 Copynumber: 2.4 Consensus size: 35
1679 TTTAAGTTGG
1689 TTTAAATTTATTTTTAAATTTAAATTTA-TCTTAAA
1 TTTAAATTTATTTTTAAATTTAAATTTACTC-TAAA
1724 TTTAAATTTATCTTTTTAAATTTAAATTTACTCTAAA
1 TTTAAATTTA--TTTTTAAATTTAAATTTACTCTAAA
* *
1761 TTTGAATTGATTT
1 TTTAAATTTATTT
1774 AAAACTTAAT
Statistics
Matches: 45, Mismatches: 2, Indels: 6
0.85 0.04 0.11
Matches are distributed among these distances:
35 13 0.29
37 30 0.67
38 2 0.04
ACGTcount: A:0.36, C:0.05, G:0.02, T:0.56
Consensus pattern (35 bp):
TTTAAATTTATTTTTAAATTTAAATTTACTCTAAA
Found at i:2522 original size:9 final size:9
Alignment explanation
Indices: 2508--2611 Score: 61
Period size: 10 Copynumber: 11.3 Consensus size: 9
2498 ATAAGGTTAT
2508 ATATTAATA
1 ATATTAATA
2517 ATATTAATA
1 ATATTAATA
*
2526 ATGATAAATA
1 AT-ATTAATA
* *
2536 ATAAATAATG
1 AT-ATTAATA
* *
2546 GTAATAAATA
1 AT-ATTAATA
*
2556 ACATTAATA
1 ATATTAATA
2565 ATTATTAATA
1 A-TATTAATA
2575 A-A--AATA
1 ATATTAATA
* *
2581 TTAATAATA
1 ATATTAATA
*
2590 ATAATAATTA
1 ATATTAA-TA
2600 ATATTAATA
1 ATATTAATA
2609 ATA
1 ATA
2612 AATAAAAATG
Statistics
Matches: 73, Mismatches: 16, Indels: 12
0.72 0.16 0.12
Matches are distributed among these distances:
6 4 0.05
7 1 0.01
8 1 0.01
9 33 0.45
10 34 0.47
ACGTcount: A:0.59, C:0.01, G:0.03, T:0.38
Consensus pattern (9 bp):
ATATTAATA
Found at i:2527 original size:3 final size:3
Alignment explanation
Indices: 2512--2612 Score: 67
Period size: 3 Copynumber: 32.0 Consensus size: 3
2502 GGTTATATAT
* * ** * *
2512 TAA TAA TAT TAA TAA TGA TAAA TAA TAAA TAA TGG TAA TAAA TAA CAT
1 TAA TAA TAA TAA TAA TAA T-AA TAA T-AA TAA TAA TAA T-AA TAA TAA
* * * *
2560 TAA TAA TTAT TAA TAA AAA TAT TAA TAA TAA TAA TAA TTAA TAT TAA
1 TAA TAA -TAA TAA TAA TAA TAA TAA TAA TAA TAA TAA -TAA TAA TAA
2607 TAA TAA
1 TAA TAA
2613 ATAAAAATGA
Statistics
Matches: 73, Mismatches: 20, Indels: 10
0.71 0.19 0.10
Matches are distributed among these distances:
3 60 0.82
4 13 0.18
ACGTcount: A:0.59, C:0.01, G:0.03, T:0.37
Consensus pattern (3 bp):
TAA
Found at i:2583 original size:22 final size:22
Alignment explanation
Indices: 2547--2616 Score: 79
Period size: 22 Copynumber: 3.1 Consensus size: 22
2537 TAAATAATGG
* *
2547 TAATAAATAACATTAATAATTAT
1 TAATAAA-AATATTAATAATTAA
2570 TAATAAAAATATTAATAA-TAA
1 TAATAAAAATATTAATAATTAA
* *
2591 TAATAATTAATATTAATAATAAA
1 TAATAA-AAATATTAATAATTAA
2614 TAA
1 TAA
2617 AAATGAAGTC
Statistics
Matches: 41, Mismatches: 4, Indels: 4
0.84 0.08 0.08
Matches are distributed among these distances:
21 8 0.20
22 21 0.51
23 12 0.29
ACGTcount: A:0.61, C:0.01, G:0.00, T:0.37
Consensus pattern (22 bp):
TAATAAAAATATTAATAATTAA
Found at i:2607 original size:13 final size:12
Alignment explanation
Indices: 2512--2612 Score: 84
Period size: 12 Copynumber: 8.5 Consensus size: 12
2502 GGTTATATAT
2512 TAATAATATTAA
1 TAATAATATTAA
* *
2524 TAATGATAAATAA
1 TAATAAT-ATTAA
**
2537 TAAATAATGGTAA
1 T-AATAATATTAA
*
2550 TAAATAACATTAA
1 T-AATAATATTAA
2563 TAAT--TATTAA
1 TAATAATATTAA
*
2573 TAAAAATATTAA
1 TAATAATATTAA
*
2585 TAATAATAATAA
1 TAATAATATTAA
2597 T--TAATATTAA
1 TAATAATATTAA
2607 TAATAA
1 TAATAA
2613 ATAAAAATGA
Statistics
Matches: 70, Mismatches: 13, Indels: 12
0.74 0.14 0.13
Matches are distributed among these distances:
10 17 0.24
12 29 0.41
13 19 0.27
14 5 0.07
ACGTcount: A:0.59, C:0.01, G:0.03, T:0.37
Consensus pattern (12 bp):
TAATAATATTAA
Found at i:2615 original size:13 final size:13
Alignment explanation
Indices: 2512--2615 Score: 64
Period size: 13 Copynumber: 8.7 Consensus size: 13
2502 GGTTATATAT
2512 TAAT-AATATTAA
1 TAATAAATATTAA
*
2524 TAAT-GATA--AA
1 TAATAAATATTAA
* **
2534 TAATAAATAATGG
1 TAATAAATATTAA
** *
2547 TAATAAATAACAT
1 TAATAAATATTAA
*
2560 TAATAATTATTAA
1 TAATAAATATTAA
2573 TAA-AAATATTAA
1 TAATAAATATTAA
2585 TAAT--A-A-TAA
1 TAATAAATATTAA
*
2594 TAATTAATATTAA
1 TAATAAATATTAA
2607 TAATAAATA
1 TAATAAATA
2616 AAAATGAAGT
Statistics
Matches: 71, Mismatches: 13, Indels: 15
0.72 0.13 0.15
Matches are distributed among these distances:
9 7 0.10
10 7 0.10
11 5 0.07
12 19 0.27
13 33 0.46
ACGTcount: A:0.60, C:0.01, G:0.03, T:0.37
Consensus pattern (13 bp):
TAATAAATATTAA
Found at i:3810 original size:30 final size:28
Alignment explanation
Indices: 3687--3837 Score: 101
Period size: 29 Copynumber: 5.2 Consensus size: 28
3677 CAAAAATCAT
* * *
3687 ATTTTGACCCTTAAACTTTTCCAAAATTCC
1 ATTTTAACCC-TAAAC-TTTCTAAAATACC
* * *
3717 ATTTCAACCCCAAACTTTTTAGAAATTA-C
1 ATTTTAACCCTAAACTTTCTA-AAA-TACC
*
3746 ATTTT-ACCCTCAAACTTT-TCAAAATCCC
1 ATTTTAACCCT-AAACTTTCT-AAAATACC
* **
3774 ATTTTTAACCTTAATTTTTCTAAAAATTACC
1 A-TTTTAACCCTAAACTTTCT-AAAA-TACC
*
3805 ATTTTACCCCTAAACTTTCTAAAATACC
1 ATTTTAACCCTAAACTTTCTAAAATACC
3833 ATTTT
1 ATTTT
3838 TTACCTTGAT
Statistics
Matches: 94, Mismatches: 18, Indels: 20
0.71 0.14 0.15
Matches are distributed among these distances:
27 1 0.01
28 23 0.24
29 33 0.35
30 33 0.35
31 4 0.04
ACGTcount: A:0.34, C:0.25, G:0.01, T:0.40
Consensus pattern (28 bp):
ATTTTAACCCTAAACTTTCTAAAATACC
Found at i:3821 original size:59 final size:59
Alignment explanation
Indices: 3687--4051 Score: 280
Period size: 59 Copynumber: 6.2 Consensus size: 59
3677 CAAAAATCAT
* * * * *
3687 ATTTTGACCCTTAAACTTTTCCAAAATTCCA-TTTCAACCCCAAACTTTTT--AGAAATTA-C
1 ATTTT-ACCCCTAAAC-TTTCAAAAATTCCATTTTTAACCTC-AA-TTTTTCCAAAAATTACC
* * *
3746 ATTTTA-CCCTCAAACTTTTC-AAAATCCCATTTTTAACCTTAATTTTTCTAAAAATTACC
1 ATTTTACCCCT-AAAC-TTTCAAAAATTCCATTTTTAACCTCAATTTTTCCAAAAATTACC
* * * ** * *
3805 ATTTTACCCCTAAACTTTCTAAAATACCATTTTTTACCTTGATTTCTCCATAAATTA-C
1 ATTTTACCCCTAAACTTTCAAAAATTCCATTTTTAACCTCAATTTTTCCAAAAATTACC
* * * * * * * *
3863 ATTTTTACCCCTAAATTTTCCAAAATCCCATTTTTTACCCCGATTTCTCTAAAAATTACC
1 A-TTTTACCCCTAAACTTTCAAAAATTCCATTTTTAACCTCAATTTTTCCAAAAATTACC
** * * *
3923 ATTTTTACCCCCGAACTTCCAAAAATTCCATTTTTAACC-CAGATTTTTCCAAAAAATATC
1 A-TTTTACCCCTAAACTTTCAAAAATTCCATTTTTAACCTCA-ATTTTTCCAAAAATTACC
* * * * *
3983 ATTTTA-TCCTCGAACTTCCAAAAATTTCATTTTTAACCTCAAATTTTCCAAAAATTACC
1 ATTTTACCCCT-AAACTTTCAAAAATTCCATTTTTAACCTCAATTTTTCCAAAAATTACC
4042 ATTTTACCCC
1 ATTTTACCCC
4052 GAATAACTAA
Statistics
Matches: 255, Mismatches: 38, Indels: 25
0.80 0.12 0.08
Matches are distributed among these distances:
56 5 0.02
57 13 0.05
58 32 0.13
59 149 0.58
60 56 0.22
ACGTcount: A:0.33, C:0.26, G:0.02, T:0.39
Consensus pattern (59 bp):
ATTTTACCCCTAAACTTTCAAAAATTCCATTTTTAACCTCAATTTTTCCAAAAATTACC
Found at i:3840 original size:30 final size:30
Alignment explanation
Indices: 3665--3958 Score: 108
Period size: 30 Copynumber: 10.0 Consensus size: 30
3655 CCCTAAAGGT
* *
3665 CCCTAAACTATC-CAAAA-ATCATATTTTGAC
1 CCCTAAACTTTCTCAAAATACCAT-TTTT-AC
* * **
3695 CCTTAAACTTT-TCCAAAATTCCATTTCAAC
1 CCCTAAACTTTCT-CAAAATACCATTTTTAC
*
3725 CCC-AAACTTT-TTAGAAATTA-CA-TTTTA-
1 CCCTAAACTTTCTCA-AAA-TACCATTTTTAC
* *
3752 CCCTCAAACTTT-TCAAAATCCCATTTTTAA
1 CCCT-AAACTTTCTCAAAATACCATTTTTAC
* ** *
3782 CCTTAATTTTTCTAAAAATTACCA-TTTTAC
1 CCCTAAACTTTCTCAAAA-TACCATTTTTAC
3812 CCCTAAACTTTCT-AAAATACCATTTTTTA-
1 CCCTAAACTTTCTCAAAATACCA-TTTTTAC
**
3841 -CCTTGA-TTTCTCCATAAATTA-CATTTTTAC
1 CCCTAAACTTTCT-CA-AAA-TACCATTTTTAC
* *
3871 CCCTAAATTTTC-CAAAATCCCATTTTTTAC
1 CCCTAAACTTTCTCAAAATACCA-TTTTTAC
*
3901 CCC--GA-TTTCTCTAAAAATTACCATTTTTAC
1 CCCTAAACTTTCTC--AAAA-TACCATTTTTAC
** *
3931 CCCCGAAC-TTC-CAAAAATTCCATTTTTA
1 CCCTAAACTTTCTC-AAAATACCATTTTTA
3959 ACCCAGATTT
Statistics
Matches: 203, Mismatches: 31, Indels: 61
0.69 0.11 0.21
Matches are distributed among these distances:
27 13 0.06
28 21 0.10
29 58 0.29
30 78 0.38
31 22 0.11
32 11 0.05
ACGTcount: A:0.33, C:0.26, G:0.02, T:0.39
Consensus pattern (30 bp):
CCCTAAACTTTCTCAAAATACCATTTTTAC
Found at i:3914 original size:118 final size:118
Alignment explanation
Indices: 3739--4051 Score: 323
Period size: 119 Copynumber: 2.7 Consensus size: 118
3729 AACTTTTTAG
** *
3739 AAATTACATTTTACCCTCAAACTTTTCAAAATCCCATTTTTAACCTTAATTTTTCTAAAAATTAC
1 AAATTACATTTTACCCTCAAACTTTTCAAAATCCCATTTTTAACCCCAATTTCTCTAAAAATTAC
* * *
3804 CA-TTTTACCCCTAAACTTTCTAAAATACCATTTTTTACCTTGATTTCTCCAT
66 CATTTTTACCCCCAAACTTCCAAAAATACCATTTTTTACCTTGATTTCTCCAT
* *
3856 AAATTACATTTTTACCC-CTAAA-TTTTCCAAAATCCCATTTTTTACCCCGATTTCTCTAAAAAT
1 AAATTACA-TTTTACCCTC-AAACTTTT-CAAAATCCCATTTTTAACCCCAATTTCTCTAAAAAT
* * * ** * *
3919 TACCATTTTTACCCCCGAACTTCCAAAAATTCCATTTTTAACCCAGATTTTTCCAA
63 TACCATTTTTACCCCCAAACTTCCAAAAATACCATTTTTTACCTTGATTTCTCCAT
* * * * ** * *
3975 AAAATATCATTTTATCCTCGAAC-TTCCAAAAATTTCATTTTTAACCTCAAATTT-TCCAAAAAT
1 AAATTA-CATTTTACCCTCAAACTTTTC-AAAATCCCATTTTTAACC-CCAATTTCTCTAAAAAT
4038 TACCA-TTTTACCCC
63 TACCATTTTTACCCC
4052 GAATAACTAA
Statistics
Matches: 162, Mismatches: 25, Indels: 17
0.79 0.12 0.08
Matches are distributed among these distances:
117 13 0.08
118 57 0.35
119 84 0.52
120 8 0.05
ACGTcount: A:0.33, C:0.26, G:0.02, T:0.40
Consensus pattern (118 bp):
AAATTACATTTTACCCTCAAACTTTTCAAAATCCCATTTTTAACCCCAATTTCTCTAAAAATTAC
CATTTTTACCCCCAAACTTCCAAAAATACCATTTTTTACCTTGATTTCTCCAT
Found at i:4002 original size:29 final size:30
Alignment explanation
Indices: 3969--4047 Score: 81
Period size: 29 Copynumber: 2.7 Consensus size: 30
3959 ACCCAGATTT
* *
3969 TTCCAAAAAATATCATTTTATCCTCGAA-C
1 TTCCAAAAAATATCATTTTAACCTCAAATC
* *
3998 TTCC-AAAAATTTCATTTTTAACCTCAAATT
1 TTCCAAAAAATATCA-TTTTAACCTCAAATC
* *
4028 TTCCAAAAATTACCATTTTA
1 TTCCAAAAAATATCATTTTA
4048 CCCCGAATAA
Statistics
Matches: 40, Mismatches: 7, Indels: 5
0.77 0.13 0.10
Matches are distributed among these distances:
28 9 0.22
29 15 0.38
30 9 0.22
31 7 0.17
ACGTcount: A:0.38, C:0.22, G:0.01, T:0.39
Consensus pattern (30 bp):
TTCCAAAAAATATCATTTTAACCTCAAATC
Found at i:4047 original size:30 final size:31
Alignment explanation
Indices: 3739--4046 Score: 154
Period size: 30 Copynumber: 10.4 Consensus size: 31
3729 AACTTTTTAG
*
3739 AAATTA-CA-TTTTACCCTCAAACTTTT-C-A
1 AAATTACCATTTTTAACCTCAAA-TTTTCCAA
* * * *
3767 AAA-TCCCATTTTTAACCTTAATTTTTCTAA
1 AAATTACCATTTTTAACCTCAAATTTTCCAA
* * *
3797 AAATTACCA-TTTT-ACCCCTAAACTTT-CTA
1 AAATTACCATTTTTAACCTC-AAATTTTCCAA
* ** *
3826 AAA-TACCATTTTTTACCT-TGATTTCTCCAT
1 AAATTACCATTTTTAACCTCAAATTT-TCCAA
*
3856 AAATTA-CATTTTT-ACCCCTAAATTTTCC-A
1 AAATTACCATTTTTAACCTC-AAATTTTCCAA
* * ** *
3885 AAA-TCCCATTTTTTACC-CCGATTTCTCTAA
1 AAATTACCATTTTTAACCTCAAATTT-TCCAA
* * * *
3915 AAATTACCATTTTTACCCCCGAA-CTTCCAA
1 AAATTACCATTTTTAACCTCAAATTTTCCAA
*
3945 AAATT-CCATTTTTAACC-CAGATTTTTCCAA
1 AAATTACCATTTTTAACCTCA-AATTTTCCAA
* * * * *
3975 AAAATATCA-TTTTATCCTCGAA-CTTCCAA
1 AAATTACCATTTTTAACCTCAAATTTTCCAA
*
4004 AAATT-TCATTTTTAACCTCAAATTTTCCAA
1 AAATTACCATTTTTAACCTCAAATTTTCCAA
4034 AAATTACCATTTT
1 AAATTACCATTTT
4047 ACCCCGAATA
Statistics
Matches: 206, Mismatches: 48, Indels: 49
0.68 0.16 0.16
Matches are distributed among these distances:
27 1 0.00
28 26 0.13
29 71 0.34
30 75 0.36
31 31 0.15
32 2 0.01
ACGTcount: A:0.33, C:0.25, G:0.02, T:0.40
Consensus pattern (31 bp):
AAATTACCATTTTTAACCTCAAATTTTCCAA
Found at i:4075 original size:59 final size:58
Alignment explanation
Indices: 3913--4097 Score: 187
Period size: 59 Copynumber: 3.1 Consensus size: 58
3903 CGATTTCTCT
* *
3913 AAAAATTACCATTTTTACCCCCGAACTTCCAAAAATTCCATTTTTAACC-CAGATTTTTCC
1 AAAAATTACCA-TTTTACCCCCGAACTTCCAAAAATT-TATTTTTAACCTCA-AATTTTCC
* * * *
3973 AAAAAATATCATTTTATCCTCGAACTTCCAAAAATTTCATTTTTAACCTCAAATTTTCC
1 AAAAATTACCATTTTACCCCCGAACTTCCAAAAATTT-ATTTTTAACCTCAAATTTTCC
* * * * *
4032 AAAAATTACCATTTTA-CCCCGAA-TAACTAAAAATTATATTTTTTACCTCGAACTTTCC
1 AAAAATTACCATTTTACCCCCGAACT-TCCAAAAATT-TATTTTTAACCTCAAATTTTCC
*
4090 CAAAATTA
1 AAAAATTA
4098 TCGTTTTGCC
Statistics
Matches: 106, Mismatches: 15, Indels: 10
0.81 0.11 0.08
Matches are distributed among these distances:
57 1 0.01
58 39 0.37
59 55 0.52
60 11 0.10
ACGTcount: A:0.37, C:0.24, G:0.03, T:0.36
Consensus pattern (58 bp):
AAAAATTACCATTTTACCCCCGAACTTCCAAAAATTTATTTTTAACCTCAAATTTTCC
Done.