Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009878.1 Kokia drynarioides strain JFW-HI SEQ_124613, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135162

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
264--309
20
2.2
20
88
3
65
30
6
0
63
1.20
252--394
77
1.9
75
81
5
171
33
7
4
54
1.48
470--540
22
3.1
21
75
25
72
32
7
4
56
1.46
1553--1673
30
4.1
30
92
2
190
26
5
4
63
1.35
1600--1663
18
3.9
17
67
30
50
28
6
3
62
1.34
1559--1692
59
2.3
58
83
10
166
29
5
2
62
1.31
1717--1994
138
2.0
138
99
0
547
42
12
5
39
1.65
2646--3275
61
10.6
59
75
11
461
40
15
16
27
1.89
2646--3258
58
10.3
59
72
11
373
40
15
16
28
1.88
2674--3272
117
5.1
116
78
10
491
40
15
16
28
1.89
3263--3332
38
1.9
36
85
8
97
30
18
11
40
1.86
10765--10806
20
2.1
20
100
0
84
40
19
23
16
1.91
15456--15525
34
2.0
35
97
2
133
17
24
17
41
1.89
16910--16934
4
6.2
4
100
0
50
28
24
48
0
1.52
21460--21547
40
2.2
40
100
0
176
9
40
4
45
1.56
23487--23517
2
15.5
2
100
0
62
48
0
51
0
1.00
33911--33949
6
6.5
6
87
0
51
23
30
0
46
1.53
35135--35478
61
5.7
60
78
11
312
30
15
15
38
1.88
35135--35478
60
5.7
60
80
8
315
30
15
15
38
1.88
35135--35473
121
2.8
121
82
6
409
30
15
15
38
1.89
37900--37966
22
3.2
22
64
23
63
25
14
14
44
1.84
37892--37971
40
2.0
40
100
0
160
25
15
15
45
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48490--48515
6
4.3
6
100
0
52
34
50
0
15
1.45
48933--49365
230
1.9
230
85
3
595
34
14
16
35
1.89
52155--52196
20
2.1
21
78
13
52
33
4
4
57
1.41
54859--54889
7
4.4
7
95
0
53
22
32
29
16
1.95
61233--61265
16
2.1
16
88
5
50
51
0
6
42
1.26
61781--61819
7
5.6
7
100
0
78
30
0
56
12
1.37
62266--62322
28
2.0
28
86
6
80
38
8
14
38
1.77
73695--73738
20
2.1
21
84
12
56
65
2
2
29
1.16
74267--74294
10
2.8
10
100
0
56
10
0
0
89
0.49
74381--74424
21
2.1
21
84
12
56
31
2
0
65
1.05
78065--78105
17
2.5
17
84
4
57
56
4
2
36
1.34
81482--81526
19
2.2
20
88
11
74
26
4
22
46
1.70
84499--84541
17
2.7
15
83
13
59
41
20
2
34
1.65
90393--90453
11
5.9
11
69
21
51
55
1
1
40
1.19
98664--99040
188
2.0
190
96
1
695
37
23
15
22
1.93
102430--102485
5
11.0
5
86
7
51
0
1
17
80
0.80
102448--102490
17
2.6
16
85
3
59
0
0
27
72
0.85
129202--129404
106
1.9
105
81
6
241
43
3
9
43
1.55

Tables:   1

The End!