Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01009893.1 Kokia drynarioides strain JFW-HI SEQ_124629, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 4157
ACGTcount: A:0.38, C:0.17, G:0.09, T:0.32

Warning! 200 characters in sequence are not A, C, G, or T


Found at i:500 original size:6 final size:6

Alignment explanation


    Indices: 489--519  Score: 62
    Period size: 6  Copynumber: 5.2  Consensus size: 6

        479 ATCACTTCTA

                                                
        489 TCATTT TCATTT TCATTT TCATTT TCATTT T
          1 TCATTT TCATTT TCATTT TCATTT TCATTT T

        520 AGTTCAATTT


Statistics
Matches: 25,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   25  1.00

ACGTcount: A:0.16, C:0.16, G:0.00, T:0.68


Consensus pattern (6 bp):   
TCATTT

Done.