Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009895.1 Kokia drynarioides strain JFW-HI SEQ_124631, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69357

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
249--302
7
8.3
7
78
15
62
0
42
0
57
0.98
294--332
4
9.8
4
83
10
53
0
23
0
76
0.78
248--306
25
2.4
25
83
10
77
0
40
0
59
0.97
292--336
21
2.2
20
84
7
65
0
26
0
73
0.84
287--343
11
5.3
11
75
12
55
1
26
0
71
0.95
287--341
21
2.5
21
78
21
60
1
25
0
72
0.94
2420--2496
40
1.9
40
97
0
145
27
16
19
36
1.93
10839--10876
17
2.2
17
81
9
51
50
0
0
50
1.00
10864--10904
11
3.8
11
83
6
57
43
0
0
56
0.99
15185--15210
2
13.0
2
100
0
52
50
0
0
50
1.00
17885--17943
29
2.0
31
86
6
86
37
8
13
40
1.75
17903--17965
31
2.1
29
85
5
81
41
7
11
39
1.70
18056--18099
16
2.8
16
89
0
61
43
0
25
31
1.55
18047--18109
16
3.9
16
75
8
56
49
1
19
30
1.58
18721--18751
15
2.1
15
93
0
53
64
0
0
35
0.94
19552--19624
19
4.1
18
74
13
62
34
0
2
63
1.09
23582--23650
18
3.7
18
71
21
61
50
11
0
37
1.39
25052--25106
28
2.0
28
85
7
76
21
0
5
72
1.04
29483--29791
29
10.8
29
73
16
191
31
5
28
34
1.80
29507--29775
28
9.4
28
70
17
126
32
5
28
33
1.80
29481--29786
57
5.3
57
75
12
186
31
5
28
34
1.81
31697--31744
24
2.0
23
84
11
62
60
4
0
35
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33480--33533
27
2.0
27
100
0
108
37
18
0
44
1.50
37661--37697
18
2.1
18
94
0
65
18
10
10
59
1.59
37663--37705
18
2.4
18
88
0
59
18
9
13
58
1.62
39560--39839
48
5.8
48
92
0
398
20
14
41
23
1.89
40808--40856
4
12.2
4
100
0
98
24
51
0
24
1.49
41379--41419
6
6.8
6
100
0
82
31
0
0
68
0.90
51301--51328
3
9.3
3
100
0
56
0
32
0
67
0.91
55329--55624
29
10.2
29
77
13
209
35
3
25
36
1.73
55329--55630
58
5.2
59
77
10
257
35
3
24
36
1.72
55329--55630
87
3.5
86
81
6
340
35
3
24
36
1.72
57424--57457
17
2.0
17
88
0
50
47
11
0
41
1.40
57441--57491
6
8.3
6
75
12
50
45
3
1
49
1.32
60083--60116
15
2.2
16
89
5
52
67
0
0
32
0.91

Tables:   1

The End!