Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009896.1 Kokia drynarioides strain JFW-HI SEQ_124634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  139409

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1360--1389
11
2.7
11
89
0
51
66
0
0
33
0.92
1972--2042
30
2.3
31
83
9
92
25
7
11
56
1.59
6864--6893
15
2.0
15
100
0
60
46
20
6
26
1.75
10243--10279
18
2.1
18
89
0
56
48
0
27
24
1.51
19018--19084
26
2.5
26
83
11
75
19
10
17
52
1.73
21914--22021
28
3.8
27
70
19
76
31
4
28
35
1.78
21893--22070
58
3.1
57
80
10
168
35
5
25
33
1.78
21923--22138
29
7.5
29
71
17
103
37
3
25
34
1.72
21921--22140
58
3.8
59
83
5
254
36
3
25
34
1.74
23144--23189
12
3.8
12
91
0
65
39
0
6
54
1.26
23916--23963
17
2.8
18
87
9
73
50
2
2
45
1.25
23913--23967
6
9.5
6
73
15
53
49
1
1
47
1.23
26870--26895
2
13.0
2
100
0
52
50
0
0
50
1.00
32272--32316
24
1.9
23
90
4
72
51
4
11
33
1.58
32455--32493
19
2.1
19
85
9
53
58
5
0
35
1.20
48080--48191
20
5.3
21
75
16
88
5
7
19
67
1.34
48161--48222
22
2.9
21
76
9
63
4
4
20
69
1.26
48214--48255
20
2.0
21
86
4
59
9
0
21
69
1.17
49981--50019
19
2.0
20
85
5
53
33
7
5
53
1.51
52483--52547
30
2.2
30
83
5
78
49
3
4
43
1.39
62774--62799
3
8.7
3
100
0
52
0
34
65
0
0.93
74885--74929
22
2.0
22
100
0
90
48
22
15
13
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81704--81736
5
6.8
5
89
6
50
81
3
0
15
0.80
81701--81731
14
2.3
13
94
5
53
83
0
0
16
0.64
88613--88665
18
2.8
18
77
11
52
52
3
0
43
1.19
101279--101346
34
2.0
34
100
0
136
29
14
11
44
1.81
103133--103222
15
6.0
15
92
0
144
28
26
36
7
1.84
103731--103755
9
2.8
9
100
0
50
20
24
24
32
1.98
106384--106422
20
2.0
20
89
0
60
43
5
0
51
1.24
111358--111443
42
2.0
42
100
0
172
48
9
16
25
1.75
111949--112149
101
2.0
101
88
0
294
34
20
18
26
1.96
113072--113111
21
1.9
21
84
0
53
42
7
5
45
1.54
115497--115535
14
2.9
14
85
7
55
15
0
20
64
1.30
127574--127603
2
15.0
2
92
0
51
46
0
3
50
1.18
127574--127612
10
3.9
10
93
0
51
43
0
7
48
1.31
130990--131015
13
2.0
13
100
0
52
69
0
0
30
0.89
131240--131289
22
2.2
22
86
10
66
54
0
2
44
1.11
135034--135249
39
5.6
39
67
13
140
25
18
31
25
1.98
134949--135290
78
4.4
78
85
2
413
25
19
30
24
1.98
135655--136471
49
16.7
47
70
10
419
19
25
17
37
1.93
135572--136471
98
9.2
97
84
2
1077
19
25
17
38
1.93
137429--137474
22
2.0
23
83
4
58
6
13
0
80
0.89
138300--138343
20
2.3
18
81
11
52
0
18
0
81
0.68
138312--138347
11
3.2
11
88
7
54
0
11
0
88
0.50
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138320--138347
12
2.3
12
100
0
56
0
7
0
92
0.37
138301--138344
19
2.2
20
88
4
63
0
15
0
84
0.63

Tables:   1

The End!