Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009901.1 Kokia drynarioides strain JFW-HI SEQ_124639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30785

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--158
23
2.2
23
88
0
73
12
24
22
42
1.87
120--197
39
2.0
39
94
0
138
11
23
23
42
1.86
159--203
23
2.0
23
95
0
81
11
22
20
46
1.81
5295--5344
26
1.9
26
88
8
75
60
6
26
8
1.48
7177--7237
30
2.0
30
96
0
113
40
3
14
40
1.62
9958--10013
24
2.2
25
81
12
60
48
14
1
35
1.54
14915--15055
57
2.5
57
96
0
255
31
19
28
20
1.97
15515--15550
18
2.0
18
88
0
54
55
13
16
13
1.69
19832--19869
19
2.1
18
85
14
51
39
2
5
52
1.38
19844--19889
20
2.3
20
82
10
51
34
2
4
58
1.30
21462--21492
2
15.5
2
100
0
62
48
0
0
51
1.00
28775--29060
60
4.9
57
77
9
249
38
4
24
32
1.77
28770--29060
117
2.5
119
83
4
342
37
5
25
31
1.78
28743--28969
29
7.8
28
70
18
110
36
5
26
31
1.80
28775--29057
29
9.6
29
67
14
116
38
4
24
32
1.77
29034--29095
29
2.1
30
88
8
92
29
1
32
37
1.67
30016--30054
3
13.0
3
100
0
78
33
0
0
66
0.92

Tables:   1

The End!