Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009948.1 Kokia drynarioides strain JFW-HI SEQ_124693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33698

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
481--571
4
22.2
4
76
8
85
0
36
0
63
0.94
481--571
17
5.3
17
76
14
80
0
36
0
63
0.94
494--571
25
3.1
25
92
3
122
0
35
0
64
0.94
4123--4159
17
2.2
17
100
0
74
21
24
0
54
1.45
4103--4150
24
2.0
24
84
8
62
20
29
2
47
1.61
6324--6357
17
2.1
17
88
5
52
61
8
0
29
1.26
14540--14578
15
2.6
15
80
15
53
25
10
10
53
1.66
17574--17760
96
1.9
95
80
10
211
35
13
21
29
1.92
18071--18378
29
10.5
29
75
10
261
30
2
29
37
1.72
18071--18378
59
5.3
59
79
7
342
30
2
29
37
1.72
18071--18381
88
3.5
86
77
10
299
31
2
29
36
1.72
18271--18391
29
4.1
29
75
16
106
33
2
29
34
1.71
20182--20293
18
6.4
17
75
10
100
51
5
0
41
1.30
20732--21286
220
2.5
219
88
0
842
21
21
21
35
1.96
32414--32589
96
1.8
95
82
9
223
34
14
22
29
1.93
32821--32884
29
2.2
29
88
5
94
25
12
28
34
1.92
32893--33176
88
3.2
88
77
9
258
33
3
27
35
1.74
32899--33179
58
4.8
58
81
9
297
33
3
27
35
1.73
32893--33176
29
9.7
28
77
12
227
33
3
27
35
1.74

Tables:   1

The End!