Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009960.1 Kokia drynarioides strain JFW-HI SEQ_124708, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79543

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
308--350
21
2.1
21
86
4
61
58
13
2
25
1.48
508--532
12
2.1
12
100
0
50
52
0
0
48
1.00
4133--4194
15
4.2
15
74
13
58
30
0
1
67
1.00
7732--7761
2
15.0
2
100
0
60
50
0
0
50
1.00
25983--26012
2
15.0
2
100
0
60
50
0
0
50
1.00
27733--27766
3
11.7
3
93
6
61
70
0
0
29
0.87
29033--29076
21
2.1
21
87
4
63
27
2
4
65
1.23
29484--30361
323
2.7
326
91
1
1374
33
14
17
33
1.91
30723--30918
30
6.6
30
81
4
209
38
2
25
34
1.69
30723--30918
59
3.3
59
77
7
200
38
2
25
34
1.69
30723--30918
89
2.2
89
80
5
218
38
2
25
34
1.69
30804--30947
30
4.9
30
82
5
105
38
3
22
35
1.71
31017--31074
29
2.0
29
90
6
91
53
3
6
36
1.45
31668--31719
2
27.0
2
88
7
81
48
0
0
51
1.00
31736--31871
62
2.2
62
77
6
139
43
5
13
38
1.66
32640--32797
76
2.1
76
86
0
226
25
17
17
39
1.91
32640--32836
76
2.6
76
82
2
209
25
17
17
38
1.92
33016--33381
155
2.4
156
85
0
491
25
19
31
23
1.98
33015--33414
78
5.1
77
81
1
431
26
19
30
23
1.98
33249--33573
117
2.8
117
82
0
400
25
18
30
24
1.98
33127--33570
39
11.4
39
70
11
239
26
20
30
23
1.98
41285--41386
50
2.0
51
96
1
188
24
18
13
43
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41655--42531
323
2.7
324
89
3
1340
34
13
17
34
1.89
42939--43110
30
5.8
30
81
5
188
40
2
22
34
1.69
42939--43110
58
2.9
58
81
8
188
40
2
22
34
1.69
43748--43773
12
2.2
12
100
0
52
42
0
7
50
1.31
43702--43847
76
1.9
77
84
8
199
45
6
9
38
1.62
44432--44548
61
1.9
62
80
5
139
35
17
8
38
1.80
47792--47873
30
2.7
30
88
7
114
48
2
0
48
1.14
47835--47877
22
2.0
22
86
13
63
46
2
0
51
1.13
51598--51625
3
9.3
3
100
0
56
32
35
0
32
1.58
52968--53007
15
2.5
17
84
8
57
62
0
2
35
1.09
54845--54875
16
1.9
16
93
0
53
48
0
3
48
1.17
56532--56589
25
2.3
26
88
8
93
36
15
10
37
1.82
58255--58292
19
2.0
20
89
5
60
42
7
5
44
1.56
59291--59318
3
9.3
3
100
0
56
32
0
0
67
0.91
60092--60121
3
10.0
3
100
0
60
66
0
0
33
0.92
66925--67001
33
2.4
33
86
6
104
32
3
14
49
1.61
76033--76269
121
2.0
121
94
1
413
48
4
17
29
1.67
78319--78381
32
1.9
33
87
3
92
52
0
4
42
1.22
79467--79534
2
33.0
2
94
5
118
48
1
1
48
1.19

Tables:   1

The End!