Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000997.1 Kokia drynarioides strain JFW-HI SEQ_112199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92702

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2625--2662
20
1.9
20
94
0
67
55
7
18
18
1.66
5153--5186
17
2.0
17
88
0
50
64
2
8
23
1.36
8994--9048
22
2.4
22
84
6
65
9
49
7
34
1.62
29327--29386
24
2.5
24
89
2
86
30
13
6
50
1.67
34225--34296
30
2.4
31
86
6
94
20
15
16
47
1.83
34387--34445
30
2.0
30
100
0
118
25
13
20
40
1.89
38361--38411
24
2.1
24
88
0
75
56
11
11
19
1.65
40352--40398
24
2.0
24
91
0
76
53
12
10
23
1.70
41119--41160
12
3.6
11
81
18
50
73
0
9
16
1.08
41118--41161
23
1.9
23
90
9
72
72
0
9
18
1.10
50031--50059
2
14.5
2
100
0
58
0
51
0
48
1.00
51696--51735
19
2.0
20
85
4
55
35
7
0
57
1.27
54161--54203
21
2.0
21
100
0
86
44
9
27
18
1.80
76160--76207
25
1.9
25
95
0
87
54
16
12
16
1.72
77614--77660
16
3.0
16
79
14
53
31
17
23
27
1.96
77620--77692
31
2.4
31
80
0
83
27
15
28
28
1.96
77619--77673
15
3.6
15
79
13
58
29
14
23
32
1.94
78538--79207
140
4.9
140
82
7
710
32
22
18
27
1.97
78678--79077
126
3.1
125
80
13
455
32
22
18
27
1.97
78527--79079
266
2.1
267
85
2
754
32
22
18
27
1.97
80584--80633
6
8.7
6
86
4
59
2
18
0
80
0.82
80584--80634
17
3.0
17
77
11
59
1
19
0
78
0.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80591--80634
5
8.0
5
85
14
52
0
22
0
77
0.77
85648--85681
16
2.1
16
88
0
50
32
17
0
50
1.47
88905--88944
4
10.0
4
100
0
80
50
25
0
25
1.50
90950--91000
25
2.0
25
88
0
75
62
13
11
11
1.54

Tables:   1

The End!