Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01009997.1 Kokia drynarioides strain JFW-HI SEQ_124752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55179

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2136--2169
2
17.5
2
93
6
61
50
0
0
50
1.00
3114--3457
43
8.0
43
88
1
465
15
31
32
20
1.93
5825--5858
17
1.9
18
94
5
61
20
5
11
61
1.50
18662--18694
16
2.1
15
94
5
57
51
6
0
42
1.26
19899--19949
21
2.4
21
90
0
75
37
23
15
23
1.93
20605--20791
52
3.6
52
88
2
259
36
25
13
25
1.92
26079--26104
13
2.0
13
100
0
52
30
0
0
69
0.89
26098--26165
19
3.4
19
71
20
59
45
2
0
51
1.16
28200--28324
23
5.3
23
79
11
105
38
20
29
11
1.88
28196--28324
48
2.7
49
76
14
130
39
20
28
11
1.87
28172--28303
23
5.5
24
77
13
98
39
19
28
12
1.89
35355--35438
23
3.6
23
80
10
91
40
20
27
11
1.87
38350--38425
38
2.0
38
100
0
152
50
13
7
28
1.69
44734--44778
19
2.4
19
88
7
65
40
0
4
55
1.20
49221--49414
103
1.9
103
88
4
293
35
14
24
24
1.94
49975--50019
19
2.4
19
81
7
56
37
0
4
57
1.19
50008--50049
13
3.1
14
80
10
52
16
4
7
71
1.26
50817--50862
22
2.1
22
84
8
58
19
10
0
69
1.17
50831--50877
21
2.2
22
88
3
69
17
6
2
74
1.12

Tables:   1

The End!