Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Scaffold103.288

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 910

Length: 1518
ACGTcount: A:0.29, C:0.21, G:0.22, T:0.28


Found at i:185 original size:6 final size:6

Alignment explanation


    Indices: 174--199  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

        164 AACCGGCGAT

                                          
        174 TTCCGA TTCCGA TTCCGA TTCCGA TT
          1 TTCCGA TTCCGA TTCCGA TTCCGA TT

        200 ACATCGGCAT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.15, C:0.31, G:0.15, T:0.38


Consensus pattern (6 bp):   
TTCCGA

Done.