Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Scaffold243.23

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3108
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28


Found at i:314 original size:3 final size:3

Alignment explanation


    Indices: 306--331  Score: 52
    Period size: 3  Copynumber: 8.7  Consensus size: 3

        296 GGGCTGTGGT

                                              
        306 TGA TGA TGA TGA TGA TGA TGA TGA TG
          1 TGA TGA TGA TGA TGA TGA TGA TGA TG

        332 GTGAGGTAAA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   23  1.00

ACGTcount: A:0.31, C:0.00, G:0.35, T:0.35


Consensus pattern (3 bp):   
TGA

Done.