Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Scaffold263.173

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 200

Length: 300
ACGTcount: A:0.23, C:0.19, G:0.35, T:0.24


Found at i:45 original size:6 final size:6

Alignment explanation


    Indices: 34--69  Score: 72
    Period size: 6  Copynumber: 6.0  Consensus size: 6

         24 GATGATGGAT

                                                     
         34 GTGGCC GTGGCC GTGGCC GTGGCC GTGGCC GTGGCC
          1 GTGGCC GTGGCC GTGGCC GTGGCC GTGGCC GTGGCC

         70 AAGGCGGATG


Statistics
Matches: 30,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   30  1.00

ACGTcount: A:0.00, C:0.33, G:0.50, T:0.17


Consensus pattern (6 bp):   
GTGGCC

Done.