Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Scaffold60.465

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 451

Length: 753
ACGTcount: A:0.32, C:0.17, G:0.22, T:0.29


Found at i:464 original size:3 final size:3

Alignment explanation


    Indices: 458--488  Score: 62
    Period size: 3  Copynumber: 10.3  Consensus size: 3

        448 ACTAATTACA

                                                     
        458 AAG AAG AAG AAG AAG AAG AAG AAG AAG AAG A
          1 AAG AAG AAG AAG AAG AAG AAG AAG AAG AAG A

        489 TCATCAGCAG


Statistics
Matches: 28,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   28  1.00

ACGTcount: A:0.68, C:0.00, G:0.32, T:0.00


Consensus pattern (3 bp):   
AAG

Done.