Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Scaffold1265.7

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2310
ACGTcount: A:0.31, C:0.18, G:0.24, T:0.27


Found at i:139 original size:6 final size:6

Alignment explanation


    Indices: 128--160  Score: 57
    Period size: 6  Copynumber: 5.5  Consensus size: 6

        118 GGTCGTGATT

                                           *      
        128 ATGGTG ATGGTG ATGGTG ATGGTG ATGTTG ATG
          1 ATGGTG ATGGTG ATGGTG ATGGTG ATGGTG ATG

        161 ATGGTGGAAA


Statistics
Matches: 26,  Mismatches: 1, Indels: 0
        0.96            0.04        0.00

Matches are distributed among these distances:
   6   26  1.00

ACGTcount: A:0.18, C:0.00, G:0.45, T:0.36


Consensus pattern (6 bp):   
ATGGTG

Done.