Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: LOC111285291

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1907
ACGTcount: A:0.25, C:0.19, G:0.22, T:0.33


Found at i:1442 original size:6 final size:6

Alignment explanation


    Indices: 1431--1471  Score: 82
    Period size: 6  Copynumber: 6.8  Consensus size: 6

       1421 CAGTGCCTTG

                                                           
       1431 CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTC
          1 CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTCA CCTTC

       1472 TGGGTAGAAT


Statistics
Matches: 35,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   35  1.00

ACGTcount: A:0.15, C:0.51, G:0.00, T:0.34


Consensus pattern (6 bp):   
CCTTCA

Done.