Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: LOC111299593

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 724

Length: 1207
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.28


Found at i:460 original size:14 final size:14

Alignment explanation


    Indices: 441--471  Score: 62
    Period size: 14  Copynumber: 2.2  Consensus size: 14

        431 TGGTTTCCCT

                          
        441 TTCATCGCCTCCTC
          1 TTCATCGCCTCCTC

                          
        455 TTCATCGCCTCCTC
          1 TTCATCGCCTCCTC

               
        469 TTC
          1 TTC

        472 TCATCTATCA


Statistics
Matches: 17,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   17  1.00

ACGTcount: A:0.06, C:0.48, G:0.06, T:0.39


Consensus pattern (14 bp):   
TTCATCGCCTCCTC
Done.