Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Cotton_A_06423

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 322

Length: 537
ACGTcount: A:0.28, C:0.28, G:0.23, T:0.20


Found at i:103 original size:6 final size:6

Alignment explanation


    Indices: 92--119  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

         82 TGCTTCATTT

                                            
         92 CCACCG CCACCG CCACCG CCACCG CCAC
          1 CCACCG CCACCG CCACCG CCACCG CCAC

        120 TGCCGAGAAC


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.18, C:0.68, G:0.14, T:0.00


Consensus pattern (6 bp):   
CCACCG

Done.