Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Cotton_A_04209

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 453

Length: 756
ACGTcount: A:0.23, C:0.30, G:0.19, T:0.28


Found at i:635 original size:6 final size:6

Alignment explanation


    Indices: 624--648  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

        614 CGGCACCCAT

                                         
        624 TGACGA TGACGA TGACGA TGACGA T
          1 TGACGA TGACGA TGACGA TGACGA T

        649 CTTTCAGCTT


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.32, C:0.16, G:0.32, T:0.20


Consensus pattern (6 bp):   
TGACGA

Done.