Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Cotton_A_10639
Parameters: 2 7 7 80 10 50 1000
Length:  1142

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148--259
6
18.2
6
72
5
62
10
4
58
26
1.51
195--263
18
3.8
18
81
7
77
11
5
57
24
1.55
212--299
30
2.9
30
86
0
95
12
5
61
20
1.51
241--312
30
2.4
30
90
0
108
12
5
59
22
1.53
302--484
30
6.1
30
86
3
199
15
8
50
25
1.71
298--472
89
2.0
88
85
1
233
14
8
51
25
1.70
262--937
60
11.1
60
70
13
297
21
6
50
21
1.72
471--661
42
4.4
42
72
10
186
27
5
49
18
1.69
483--619
30
4.6
30
81
0
157
27
5
49
18
1.68
513--730
102
2.1
102
88
0
319
26
6
49
18
1.71
615--952
30
11.7
30
76
8
243
23
6
49
20
1.72
645--862
42
5.2
39
69
20
147
22
7
50
20
1.73
390--718
132
2.5
132
86
2
471
23
7
49
19
1.73
708--748
12
3.4
12
79
0
55
17
7
53
21
1.67
615--949
114
2.9
116
79
9
357
23
6
49
20
1.73
792--832
12
3.4
12
79
0
55
17
7
53
21
1.67
648--874
84
2.7
84
95
0
409
22
7
48
20
1.75
888--947
18
3.7
18
64
25
51
23
3
50
23
1.64
980--1038
24
2.5
24
75
10
66
6
10
57
25
1.56
999--1066
30
2.3
30
89
0
100
10
7
57
25
1.57
1047--1096
6
8.3
6
77
0
55
14
4
60
22
1.51
992--1080
24
3.5
24
77
16
88
12
5
56
25
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1041--1091
24
2.1
24
85
0
66
15
5
54
23
1.63

Tables:   1

The End!