Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Cotton_A_22158
Parameters: 2 7 7 80 10 50 1000
Length:  5520

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4577--4721
21
6.9
21
81
1
148
19
39
14
26
1.90
4577--4721
42
3.5
42
83
1
166
19
39
14
26
1.90
4598--4742
63
2.3
63
80
2
157
20
37
15
26
1.92
4786--4865
21
3.8
21
89
0
106
27
37
10
25
1.88
4804--4874
21
3.4
21
90
0
106
25
39
8
26
1.84
4861--4920
21
2.9
21
87
0
75
23
50
8
18
1.74
4792--4910
42
2.9
41
81
3
130
25
42
10
22
1.85
4882--4994
42
2.7
41
79
8
120
24
45
8
21
1.80
4882--4979
21
4.7
21
82
2
108
24
44
9
21
1.81
4903--5084
21
8.7
21
78
3
107
23
43
8
24
1.81
4966--5109
42
3.4
42
85
0
153
21
44
8
25
1.80
4882--5108
63
3.6
62
77
2
195
22
44
8
23
1.81
4903--5129
42
5.4
42
76
5
109
22
44
9
23
1.82
4969--5129
84
1.9
84
80
0
187
21
44
9
24
1.83
5113--5179
21
3.2
21
78
0
71
31
38
8
20
1.84

Tables:   1

The End!