Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Cotton_A_01087

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2742
ACGTcount: A:0.28, C:0.22, G:0.24, T:0.26


Found at i:36 original size:3 final size:3

Alignment explanation


    Indices: 28--64  Score: 74
    Period size: 3  Copynumber: 12.3  Consensus size: 3

         18 TTACCATCCT

                                                             
         28 ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC A
          1 ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC ACC A

         65 AAACCCTAGC


Statistics
Matches: 34,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   34  1.00

ACGTcount: A:0.35, C:0.65, G:0.00, T:0.00


Consensus pattern (3 bp):   
ACC

Done.