Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: evm.model.Ga07G2427

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 462

Length: 771
ACGTcount: A:0.28, C:0.18, G:0.30, T:0.23


Found at i:119 original size:3 final size:3

Alignment explanation

Indices: 111--142 Score: 64 Period size: 3 Copynumber: 10.7 Consensus size: 3 101 TAGGGTTGCC 111 TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG TG 1 TGG TGG TGG TGG TGG TGG TGG TGG TGG TGG TG 143 ACGGTGAAGT Statistics Matches: 29, Mismatches: 0, Indels: 0 1.00 0.00 0.00 Matches are distributed among these distances: 3 29 1.00 ACGTcount: A:0.00, C:0.00, G:0.66, T:0.34 Consensus pattern (3 bp): TGG Done.