Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g01503.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2205
ACGTcount: A:0.29, C:0.20, G:0.22, T:0.29


Found at i:93 original size:21 final size:21

Alignment explanation


    Indices: 68--111  Score: 88
    Period size: 21  Copynumber: 2.1  Consensus size: 21

         58 TTCAATGGAG

                                 
         68 TCCATCACTCAAAATGGTACC
          1 TCCATCACTCAAAATGGTACC

                                 
         89 TCCATCACTCAAAATGGTACC
          1 TCCATCACTCAAAATGGTACC

              
        110 TC
          1 TC

        112 AAATGGCCAT


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  21   23  1.00

ACGTcount: A:0.32, C:0.34, G:0.09, T:0.25


Consensus pattern (21 bp):   
TCCATCACTCAAAATGGTACC
Done.