Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga02g01573.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 568

Length: 947
ACGTcount: A:0.29, C:0.19, G:0.17, T:0.35


Found at i:434 original size:6 final size:6

Alignment explanation


    Indices: 423--450  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

        413 ACATATGGTG

                                            
        423 TTTTCT TTTTCT TTTTCT TTTTCT TTTT
          1 TTTTCT TTTTCT TTTTCT TTTTCT TTTT

        451 AATCAAATTG


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.00, C:0.14, G:0.00, T:0.86


Consensus pattern (6 bp):   
TTTTCT

Done.