Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g00116.F11

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3869
ACGTcount: A:0.29, C:0.18, G:0.22, T:0.31


Found at i:1389 original size:6 final size:6

Alignment explanation


    Indices: 1378--1409  Score: 64
    Period size: 6  Copynumber: 5.3  Consensus size: 6

       1368 TGTTAATACC

                                                 
       1378 TGTATA TGTATA TGTATA TGTATA TGTATA TG
          1 TGTATA TGTATA TGTATA TGTATA TGTATA TG

       1410 CATGTCACCT


Statistics
Matches: 26,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   26  1.00

ACGTcount: A:0.31, C:0.00, G:0.19, T:0.50


Consensus pattern (6 bp):   
TGTATA

Done.