Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g00525.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 550

Length: 917
ACGTcount: A:0.27, C:0.23, G:0.20, T:0.29


Found at i:355 original size:14 final size:14

Alignment explanation


    Indices: 336--363  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

        326 ACGATGTCGA

                          
        336 CACCGAACAACGGG
          1 CACCGAACAACGGG

                          
        350 CACCGAACAACGGG
          1 CACCGAACAACGGG

        364 TAACAATCTT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.36, C:0.36, G:0.29, T:0.00


Consensus pattern (14 bp):   
CACCGAACAACGGG
Done.