Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g00531.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2151
ACGTcount: A:0.28, C:0.19, G:0.20, T:0.34


Found at i:1854 original size:4 final size:4

Alignment explanation


    Indices: 1845--1882  Score: 76
    Period size: 4  Copynumber: 9.5  Consensus size: 4

       1835 AAAATGTGAC

                                                           
       1845 ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT AT
          1 ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT ATCT AT

       1883 ATAATTAGAT


Statistics
Matches: 34,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   34  1.00

ACGTcount: A:0.26, C:0.24, G:0.00, T:0.50


Consensus pattern (4 bp):   
ATCT

Done.