Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g00888.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2649
ACGTcount: A:0.28, C:0.19, G:0.21, T:0.33


Found at i:16 original size:6 final size:6

Alignment explanation


    Indices: 2--37  Score: 63
    Period size: 6  Copynumber: 6.0  Consensus size: 6

          1 G

                *                                    
          2 CTATTC CTATGC CTATGC CTATGC CTATGC CTATGC
          1 CTATGC CTATGC CTATGC CTATGC CTATGC CTATGC

         38 ATTTGACCGT


Statistics
Matches: 29,  Mismatches: 1, Indels: 0
        0.97            0.03        0.00

Matches are distributed among these distances:
   6   29  1.00

ACGTcount: A:0.17, C:0.33, G:0.14, T:0.36


Consensus pattern (6 bp):   
CTATGC

Done.