Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g00997.P1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 946

Length: 1577
ACGTcount: A:0.25, C:0.20, G:0.19, T:0.35


Found at i:120 original size:6 final size:6

Alignment explanation


    Indices: 109--136  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

         99 TTTCCCTCAC

                                            
        109 TGCAAT TGCAAT TGCAAT TGCAAT TGCA
          1 TGCAAT TGCAAT TGCAAT TGCAAT TGCA

        137 GGCCGTTGTT


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32


Consensus pattern (6 bp):   
TGCAAT

Done.