Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01033.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 559

Length: 933
ACGTcount: A:0.29, C:0.21, G:0.23, T:0.27


Found at i:837 original size:11 final size:11

Alignment explanation


    Indices: 821--845  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

        811 ATGTGTATAT

                       
        821 TATATAGAATA
          1 TATATAGAATA

                       
        832 TATATAGAATA
          1 TATATAGAATA

               
        843 TAT
          1 TAT

        846 GAGCTTCCTA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.52, C:0.00, G:0.08, T:0.40


Consensus pattern (11 bp):   
TATATAGAATA
Done.