Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01137.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 694

Length: 1157
ACGTcount: A:0.23, C:0.24, G:0.25, T:0.29


Found at i:1008 original size:6 final size:6

Alignment explanation


    Indices: 999--1023  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

        989 GTTTTGTGTT

                                         
        999 TGTACC TGTACC TGTACC TGTACC T
          1 TGTACC TGTACC TGTACC TGTACC T

       1024 AGCTACATAA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.16, C:0.32, G:0.16, T:0.36


Consensus pattern (6 bp):   
TGTACC

Done.