Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00585.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 342

Length: 571
ACGTcount: A:0.32, C:0.18, G:0.21, T:0.30


Found at i:142 original size:6 final size:6

Alignment explanation


    Indices: 131--159  Score: 58
    Period size: 6  Copynumber: 4.8  Consensus size: 6

        121 TGTGCAGTCA

                                             
        131 AAGAAC AAGAAC AAGAAC AAGAAC AAGAA
          1 AAGAAC AAGAAC AAGAAC AAGAAC AAGAA

        160 GAACAGAAGA


Statistics
Matches: 23,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   23  1.00

ACGTcount: A:0.69, C:0.14, G:0.17, T:0.00


Consensus pattern (6 bp):   
AAGAAC

Done.