Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00599.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2884
ACGTcount: A:0.29, C:0.22, G:0.23, T:0.26


Found at i:2321 original size:6 final size:6

Alignment explanation


    Indices: 2310--2337  Score: 56
    Period size: 6  Copynumber: 4.7  Consensus size: 6

       2300 TCCACAACCG

                                            
       2310 ACCAAC ACCAAC ACCAAC ACCAAC ACCA
          1 ACCAAC ACCAAC ACCAAC ACCAAC ACCA

       2338 TCATCATCAA


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   22  1.00

ACGTcount: A:0.50, C:0.50, G:0.00, T:0.00


Consensus pattern (6 bp):   
ACCAAC

Done.