Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01379.N5

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 782

Length: 1304
ACGTcount: A:0.28, C:0.22, G:0.19, T:0.31


Found at i:387 original size:2 final size:2

Alignment explanation


    Indices: 382--415  Score: 68
    Period size: 2  Copynumber: 17.0  Consensus size: 2

        372 CTTCATCAAG

                                                              
        382 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC
          1 TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC TC

        416 GTACAGAGTA


Statistics
Matches: 32,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   32  1.00

ACGTcount: A:0.00, C:0.50, G:0.00, T:0.50


Consensus pattern (2 bp):   
TC

Done.