Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01466.N1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 834

Length: 1391
ACGTcount: A:0.30, C:0.16, G:0.19, T:0.34


Found at i:935 original size:2 final size:2

Alignment explanation


    Indices: 928--960  Score: 57
    Period size: 2  Copynumber: 16.5  Consensus size: 2

        918 GAATCATTTG

                                                      *      
        928 TA TA TA TA TA TA TA TA TA TA TA TA TA TA GA TA T
          1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T

        961 CATCGTTTTG


Statistics
Matches: 29,  Mismatches: 2, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
   2   29  1.00

ACGTcount: A:0.48, C:0.00, G:0.03, T:0.48


Consensus pattern (2 bp):   
TA

Done.