Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga01g00056.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 927

Length: 1545
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.31


Found at i:102 original size:14 final size:14

Alignment explanation


    Indices: 80--109  Score: 51
    Period size: 14  Copynumber: 2.1  Consensus size: 14

         70 ATCACTGTGC

                          
         80 TATACACACACATA
          1 TATACACACACATA

                *         
         94 TATATACACACATA
          1 TATACACACACATA

              
        108 TA
          1 TA

        110 CTTTTAAAAC


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  14   15  1.00

ACGTcount: A:0.50, C:0.23, G:0.00, T:0.27


Consensus pattern (14 bp):   
TATACACACACATA
Done.