Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01511.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1776
ACGTcount: A:0.27, C:0.22, G:0.22, T:0.30


Found at i:87 original size:10 final size:10

Alignment explanation


    Indices: 72--101  Score: 51
    Period size: 10  Copynumber: 3.0  Consensus size: 10

         62 TCGGCTGTGG

                   *  
         72 GCTGTGCTTT
          1 GCTGTGCCTT

                      
         82 GCTGTGCCTT
          1 GCTGTGCCTT

                      
         92 GCTGTGCCTT
          1 GCTGTGCCTT

        102 ATCTCCTTTC


Statistics
Matches: 19,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  10   19  1.00

ACGTcount: A:0.00, C:0.27, G:0.30, T:0.43


Consensus pattern (10 bp):   
GCTGTGCCTT
Done.