Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01755.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 529

Length: 882
ACGTcount: A:0.21, C:0.23, G:0.27, T:0.29


Found at i:602 original size:3 final size:3

Alignment explanation


    Indices: 594--618  Score: 50
    Period size: 3  Copynumber: 8.3  Consensus size: 3

        584 GGGTACCTTA

                                             
        594 TGG TGG TGG TGG TGG TGG TGG TGG T
          1 TGG TGG TGG TGG TGG TGG TGG TGG T

        619 TTGGGGGATC


Statistics
Matches: 22,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   3   22  1.00

ACGTcount: A:0.00, C:0.00, G:0.64, T:0.36


Consensus pattern (3 bp):   
TGG

Done.