Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01931.F2

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3434
ACGTcount: A:0.26, C:0.19, G:0.20, T:0.35


Found at i:386 original size:2 final size:2

Alignment explanation


    Indices: 379--432  Score: 108
    Period size: 2  Copynumber: 27.0  Consensus size: 2

        369 CTTTGTCTTT

                                                                          
        379 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC
          1 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC

                             
        421 AC AC AC AC AC AC
          1 AC AC AC AC AC AC

        433 TGTCACTGTT


Statistics
Matches: 52,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   52  1.00

ACGTcount: A:0.50, C:0.50, G:0.00, T:0.00


Consensus pattern (2 bp):   
AC

Done.