Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Ga03g01990.F1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1912
ACGTcount: A:0.27, C:0.18, G:0.21, T:0.35


Found at i:471 original size:14 final size:14

Alignment explanation


    Indices: 452--478  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

        442 TTTGGGTTTT

                          
        452 TCTACTGATTTTCG
          1 TCTACTGATTTTCG

                         
        466 TCTACTGATTTTC
          1 TCTACTGATTTTC

        479 AACCATGTAC


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.15, C:0.22, G:0.11, T:0.52


Consensus pattern (14 bp):   
TCTACTGATTTTCG
Done.